Browsing by Author "Sözdinler, Melih"
Now showing items 1-4 of 4
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Biclustering Expression Data Based on Expanding Localized Substructures
Erten, Cesim; Sözdinler, Melih (Springer-Verlag Berlin, 2009)Biclustering gene expression data is the problem of extracting submatrices of genes and conditions exhibiting significant correlation across both the rows and the columns of a data matrix of expression values. We provide ... -
Improving performances of suboptimal greedy iterative biclustering heuristics via localization
Erten, Cesim; Sözdinler, Melih (Oxford University Press, 2010)Motivation: Biclustering gene expression data is the problem of extracting submatrices of genes and conditions exhibiting significant correlation across both the rows and the columns of a data matrix of expression values. ... -
An integrated model for visualizing biclusters from gene expression data and PPI networks
We provide a model to integrate the visualization of biclusters extracted from gene expresion data and the underlying PPI networks. Such an integration conveys the biologically relevant interconnection between these two ... -
Reliability-Oriented bioinformatic networks visualization
Aladağ, Ahmet Emre; Erten, Cesim; Sözdinler, Melih (Oxford University Press, 2011)We present our protein-protein interaction (PPI) network visualization system RobinViz (reliability-oriented bioinformatic networks visualization). Clustering the PPI network based on gene ontology (GO) annotations or ...